• Fixed an issue where sparse TrackMate XML files caused compareDatasets() to fail
  • These files are skipped and a warning is issued. They can be loaded and analyzed manually if desired (limit is more than 3 tracks with at least one with 10 frames)
  • Warning for TrackMate XML files that contain tracks with more than one point per frame
  • Added xy scaling for shape descriptors
  • Added report of intensity and duration to workflow
  • Added estimator of diffusion co-efficient and histogram of D (per track)
  • Ability to load a ground truth csv dataset
  • Compare multiple ground truth datasets
  • More flexibility to automated workflows (axes on MSD plots can be configured)
  • Minor fixes to plots in compareDatasets()
  • Better handling in jump distance calculation
  • Test datasets available for multiple comparisons
  • Improved documentation
  • Fixes for parallelisation. Windows users still do not benefit from parallel processing that Mac/Linux users enjoy.
  • More flexibility to automated workflows by allowing parameters to be passed via ellipsis to reportDataset() and compareDatasets()
  • Better resilience to failures in jump distance fitting, and reading XML
  • Fixes for edge cases and issues
  • Fixes for parallelisation issue and better handling of fitting errors
  • First release on GitHub