Changelog

Source: NEWS.md

TrackMateR 0.3.10

  • Fixed an issue where sparse TrackMate XML files caused compareDatasets() to fail
  • These files are skipped and a warning is issued. They can be loaded and analyzed manually if desired (limit is more than 3 tracks with at least one with 10 frames)

TrackMateR 0.3.9

  • Warning for TrackMate XML files that contain tracks with more than one point per frame
  • Added xy scaling for shape descriptors

TrackMateR 0.3.8

  • Added report of intensity and duration to workflow

TrackMateR 0.3.7

  • Added estimator of diffusion co-efficient and histogram of D (per track)

TrackMateR 0.3.6

  • Ability to load a ground truth csv dataset
  • Compare multiple ground truth datasets

TrackMateR 0.3.5

  • More flexibility to automated workflows (axes on MSD plots can be configured)
  • Minor fixes to plots in compareDatasets()
  • Better handling in jump distance calculation
  • Test datasets available for multiple comparisons
  • Improved documentation

TrackMateR 0.3.4

  • Fixes for parallelisation. Windows users still do not benefit from parallel processing that Mac/Linux users enjoy.

TrackMateR 0.3.3

  • More flexibility to automated workflows by allowing parameters to be passed via ellipsis to reportDataset() and compareDatasets()
  • Better resilience to failures in jump distance fitting, and reading XML

TrackMateR 0.3.2

  • Fixes for edge cases and issues

TrackMateR 0.3.1

  • Fixes for parallelisation issue and better handling of fitting errors

TrackMateR 0.3.0

  • First release on GitHub