Compare ground truth datasets

Requires Ground Truth csv files to be organised into subfolders named according to the condition. Outputs are saved to `Output/Plots/GT/` in the working directory.

compareGTDatasets(
  path = NULL,
  xyscale = 0.04,
  xyunit = "um",
  tscale = 0.06,
  tunit = "s",
  ...
)

Arguments

path

string, filepath to directory equivalent to Data in compareDatasets()

xyscale

numeric, pixel size (ground truth data is in pixel units)

xyunit

string, spatial units

tscale

numeric, frame interval (ground truth data is in frames)

tunit

string, temporal units

...

pass additional parameters to modify the defaults (N, short, deltaT, mode, nPop, init, timeRes, breaks, radius)

Value

multiple pdf reports